INSTRUCTIONS TO AUTHORS
CalCOFI Rep., Vol. 52, 2011 ( pdf version)
CalCOFI Reports is a peer-reviewed journal. Papers submitted for publication in the “Scientific Contributions” section are read by two or more referees and by arbiters when necessary; “Symposium” papers are invited by the convener of the annual symposium and are reviewed and edited at the convener’s discretion.The “Reports, Review, and Publications” section contains newsworthy information on the status of stocks and environmental conditions; the papers in this section are not peer reviewed; the CalCOFI Editorial Board will not consider unsolicited review papers.
The CalCOFI Editorial Board will consider for publication in the “Scientific Contributions” section manuscripts not previously published elsewhere that address the following in relation to the North Pacific, the California Current, and the Gulf of California: marine organisms; marine chemistry, fertility, and food chains; marine fishery modeling, prediction, policy, and management; marine climatology, paleoclimatology, ecology, and paleoecology; marine pollution; physical, chemical, and biological oceanography; and new marine instrumentation and methods.
Submission Guidelines
Submissions must be received no later than January 15 of the year in which publication is sought. Please submit manuscripts as MS word documents in electronic format via email to:
This e-mail address is being protected from spambots. You need JavaScript enabled to view it
. (use Word; see “Manuscript Guidelines” below for more details on preparing tables and figures). Manuscript should be submitted to:
CalCOFI Coordinator
Southwest Fisheries Science Center
8604 La Jolla Shores Drive
La Jolla, California 92037-1508 USA
Fax: (858) 546-5656
The manuscript should contain the following parts:
- A title page containing the manuscript’s title, your name, your institutional affiliation and contact information (address, telephone and fax numbers, e-mail address), and a word count
- An abstract of no more than 150 words that succinctly expresses only the manuscript’s most central points, using the active voice
- Body of the text, including any footnotes
- Literature cited, in alphabetical order
- Acknowledgments, if any
- Tables
- Figures and captions
Manuscript Guidelines
Length.
Unless previously approved by the Scientific Editor, manuscripts should not exceed 6,000 words, including title page, abstract, text body, footnotes, acknowledgments, and literature cited but excluding figures and tables.
Text.
Double-space all elements of the text, allow margins of at least 1 inch on all sides, and use a standard font (such as Times or Times New Roman) no smaller than 12 points. Number the pages consecutively. Eliminate all nonessential formatting. Indicate subordination of heads consistently; for example, use all caps for the main heads, boldface for the next level, and italics for the third level.To indent paragraphs, use the tab key, not the space bar or a “style” feature of any sort. Never use letters for numbers or vice versa; in other words, do not type the lowercase “el” for the number “one” or the capital letter “oh” for zero. Use your word-processor’s automatic footnoting feature to insert footnotes.
Acknowledgments, if included, should be placed at the end of the text and may include funding sources. Place the entire text (title page, abstract, text body, footnotes, acknowledgments, and literature cited) in one document file, and label it with your name— for example,“Smith text.doc.”
Tables.
Use your word-processor’s Table feature, rather than spaces or tabs, to create the columns and rows. Use minimal formatting, and do not insert vertical or horizontal rules. Double-space the tables and use a standard font, such as Times or Times New Roman. Number the tables consecutively, and provide a brief title for each. Place explanatory material and sources in a note beneath the table. Place the tables in a separate file labeled, for example,“Smith tables.doc,” and place this on the disk with the text file. Provide one printout of each table, gathered together at the end of the text printout submitted. Be sure each table is specifically referred to in the text.
Figures.
Figures must be in black and white. Submit figures—whether drawings, graphs, or photographs—as high-resolution electronic files as separate files. Label the files, for example,“Smith fig 1” and “Smith fig 2.”The preferred file formats are JPG and PDF. If you are submitting as a PDF, please embed all fonts. In the printed volume figures will appear in black and white only and may be reduced from their original size. Contributors are advised to make a trial reduction of complex figures to ensure that patterns, shading, and letters will remain distinct when reduced. Include a north arrow and latitude and longitude lines on maps. Use consistent labels and abbreviations and the same style of lettering for all figures if possible. Number figures consecutively, and specifically refer to each in the text. Provide a caption for each figure. Gather the captions together, and place them at the end of the electronic text file, following the “Literature Cited” section; include the captions in the printouts.
Editorial Style
For matters of editorial style, contributors should consult recent editions of CalCOFI Reports. Contributors may also refer to The Chicago Manual of Style, 15th ed.Whenever possible, write
in the first person, and use active verbs. Use the full name of a CalCOFI Rep., Vol. 52, 2011 person, organization, program, or agency when mentioning it for the first time in your manuscript. Double-check the spelling of non-English words, and include special characters such as accents and umlauts. Use correct SI symbols for units of measure in figures, tables, and text (other units may be given in parentheses). Prepare equations in accordance with similar expressions in the printed literature.
Cite sources in the text as Smith (1999) or Smith and Jones (2000) or (Smith and Jones 2000; Gabriel et al. 1998) (the latter when there are three or more authors).There should be no comma between author and date. In the “Literature Cited” section, show sources alphabetically by the first author’s surname, and secondarily in chronological order with earliest dates first. Provide surnames and first initials of all authors; do not use “et al.” for multi-authored works. No source should appear in the “Literature Cited” section unless it is specifically cited in the text, tables, or figure captions. Personal
communications and unpublished documents should not be included in the “Literature Cited” section but may be cited in the text in parentheses; use footnotes only when parentheses will not suffice.
Abbreviate journal titles to match BIOSYS usage. Each source must be complete according to the following guidelines:
ARTICLE IN A JOURNAL:
Barnes, J.T., L. D. Jacobson,A. D. MacCall, and P.Wolf. 1992. Recent population trends and abundance estimates for the Pacific sardine (Sardinops sagax). Calif. Coop. Oceanic Fish. Invest. Rep. 33:60–75.
BOOK:
Odum, E. P. 1959. Fundamentals of ecology. 2nd ed. Philadelphia: Saunders. 546 pp.
CHAPTER IN A BOOK:
Wooster,W. S., and J. L. Reid Jr. 1963. Eastern boundary currents. In The sea, M. N. Hill, ed. New York: Interscience Pub., pp. 253–280.
If your manuscript is accepted for publication, we will provide further guidance regarding preparing it for editing.
CalCOFI 2012
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Table of Contents pages have been indexed and may be searched using this search form.
CalCOFI Reports are published annually in conjunction with the CalCOFI Conference.
Most issues review the state of the California Current and fisheries for the last year as well as Conference Symposium and contributed papers.
CalCOFI Reports: (searchable pdfs) Index Issues Vols 1-23; 24-29; 30-34; 35-40
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| CalCOFI Spatial Pattern Figures for CalCOFI cruises including upper ocean geostrophic flow estimated from the 0/500 dbar dynamic height field, 10 m salinity, 10 m temperature, and 10 m chlorophll a. |
I. Reports, Reviews, and Publications
- Report of the CalCOFI Committee
- Review of Selected California Fisheries for 2010: Coastal Pelagic Finfish, Market Squid, Ocean Salmon, Groundfish, Highly Migratory Species, Dungeness Crab, Spiny Lobster, Spot Prawn, Kellet’s Whelk, and White Seabass. Dale Sweetnam, editor.
- State of the California Current 2010–2011: Regional Variable Responses to a Strong (But Fleeting?) La Niña. Eric Bjorkstedt, Ralf Goericke, Sam McClatchie, Ed Weber, William Watson, Nancy Lo, Bill Peterson, Bob Emmett, Ric Brodeur, Jay Peterson, Marisa Litz, Jose Gomez-Valdez, Gilberto Gaxiola-Castro, Bertha Lavaniegos, Francisco Chavez, Curtis A. Collins, John Field, Keith Sakuma, Pete Warzybok, Russell Bradley, Jaime Jahncke, Steven Bograd, Franklin Schwing, Gregory S. Campbell, John Hildebrand, William Sydeman, Sarah Ann Thompson, John Largier, Chris Halle, Sung Yong Kim, Jeff Abell.
- Publications
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Symposium: Forecasting Fishery Productivity in the California Current.
I. Reports, Reviews, and Publications
- Report of the CalCOFI Committee
- Review of Selected California Fisheries for 2009: Coastal Pelagic Finfish, Market Squid, Red Abalone, Dungeness Crab, Pacific Herring, Groundfish/Nearshore Live-Fish, Highly Migratory Species, Kelp, California Halibut, and Sandbasses. Dale Sweetnam, editor
- State of the California Current 2009–2010: Regional variation persists through transition from La Niña to El Niño (and back?). Eric Bjorkstedt, Ralf Goericke, Sam McClatchie, Ed Weber, William Watson, Nancy Lo, Bill Peterson, Bob Emmett, Jay Peterson, Reginaldo Durazo, Gilberto Gaxiola-Castro, Francisco Chavez, J.T. Pennington, C.A. Collins, John Field, Steve Ralston, Keith Sakuma, Steven Bograd, Franklin Schwing,Yan Xue,William Sydeman, Sarah Ann Thompson, Jarrod A. Santora, John Largier, Chris Halle, Steven Morgan, Sung Yong Kim, Karlina Merkens, John Hildebrand, Lisa Munger
- Publications
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CalCOFI Report Vol 50, 2009 (Complete report pdf; individual pdf links below)
Symposium: Copepod Species Richness as an Indicator of Long-term Changes in the Coastal Ecosystem of the Northern California Current.
I. Reports, Reviews, and Publications
- Report of the CalCOFI Committee
- Review of Selected California Fisheries for 2008: Coastal Pelagic Finfish,Market Squid,Ocean Salmon,Groundfish, California Spiny Lobster, Spot Prawn,White Seabass, Kelp Bass, Thresher Shark,Skates and Rays, Kellet’ s Whelk and Sea Cucumber
- The State of the California Current, Spring 2008-2009: Cold Conditions Drive Regional Differences. Sam McClatchie, Ralf Goericke, Franklin B. Schwing, Steven J . Bograd,William T . Peterson, Robert Emmett, Richard Charter ,William Watson, Nancy Lo, Kevin Hill, Curtis Collins,Mati Kahru, B. Greg Mitchell, J . Anthony Koslow, Jose Gomez-Valdes , Bertha E. Lavaniegos, Gilberto Gaxiola-Castro, Jon Gottschalk, Michelle L’Heureux, Yan Xue,Marlenne Manzano-Sarabia, Eric Bjorkstedt, Stephen Ralston, John Field, Laura Rogers-Bennett, Lisa Munger , Greg Campbell, Karlina Merkens, Dominique Camacho, Andrea Havron, Annie Douglas and John Hildebrand
- Publications
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CalCOFI Report Vol 49, 2008 (Complete report pdf; individual pdf links below)
Symposium: Jumbo Squid (Dosidicus gigas) Invasions in the Eastern Pacific Ocean.
I. Reports, Reviews, and Publications
- The State of the California Current, 2007-2008: La Nina Conditions and Their Effects on the Ecosystem. Sam McClatchie, Ralf Goericke, J. Anthony Koslow, Franklin B. Schwing, Steven J. Bograd, Richard Charter, William Watson, Nancy Lo, Kevin Hill, Jon Gottschalk, Michelle L’Heureux, Yan Xue, William T. Peterson, Robert Emmett, Curtis Collins, Gilberto Gaxiola-Castro, Reginaldo Durazo, Mati Kahru, B. Greg Mitchell, K. David Hyrenbach, W. J. Sydeman, R. W. Bradley, P. Warzybok, Eric Bjorkstedt.
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2007: Coastal Pelagic Finfish, Market Squid, Dungeness Crab, California Spiny Lobster, Highly Migratory Species, Ocean Salmon, Groundfish, California Halibut, Hagfish, Pacific Herring, and Recreational.
- Publications
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CalCOFI Report, Vol. 48, 2007 (Complete report pdf; individual pdf links below)
Symposium: Ecological Interactions Useful For Marine Ecosystem-based Management: The Role Of Positive Species Interactions, Ecosystem Engineers, And Species Diversity
I. Reports, Review, and Publications
- The State of the California Current, 2006-2007: Regional and Local Processes Dominate. Ralf Goericke, Elizabeth Venrick, Tony Koslow, William J. Sydeman, Franklin B. Schwing, Steven J. Bograd,William T. Peterson, Robert Emmett, J. Ruben Lara Lara, Gilberto Gaxiola Castro, Jose Gomez Valdez,K. David Hyrenbach, Russel W. Bradley, Michael J. Weise, James T. Harvey, Curtis Collins, and Nancy C. H. Lo
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2006: Coastal Pelagic Finfish, Market Squid, Dungeness Crab, Spot Prawn, Highly Migratory Species, Ocean Salmon,California Halibut, Nearshore Live-Fishes, Cabezon, Surfperches, Leopard Sharks. California Department of Fish & Game
- Publications
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CalCOFI Report, Vol. 47, 2006 (Complete report pdf; individual pdf links below)
Symposium from CalCOFI Conference 2005: CalCOFI: The Sum of the Parts
In Memoriam: Laurence E. Eber
I. Reports, Review, and Publications
- The State of the California Current, 2005-2006: Warm in the North, Cool in the South. William T. Peterson, Robert Emmett, Ralf Goericke, Elizabeth Venrick, Arnold Mantyla, Steven J. Bograd, Franklin B. Schwing, Roger Hewitt, Nancy Lo, William Watson, Jay Barlow, Mark Lowry, Steve Ralston, Karin A. Forney, Bertha E. Lavaniegos, William J. Sydeman, David Hyrenbach, Russel W. Bradley, Pete Warzybok, Francisco Chavez, Karen Hunter, Scott Benson, Michael Weise, and James Harvey
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2005: Coastal Pelagic Finfish, Market Squid, Dungeness Crab, Sea Urchin, Abalone, Kellet's Whelk, Groundfish, Highly Migratory, Species, Ocean Salmon, Nearshor Live-Fish, Pacific Herring, and White Seabass
- Publications
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CalCOFI Rep., Vol. 46, 2005 (Complete report pdf; individual pdf links below)
Symposium of the CalCOFI Conference, 2004: Pacific Sardine: Past, Present, and Future
In Memoriam: Angeles Alvarino
I. Reports, Review, and Publications
- The State of the California Current, 2004–2005: Still Cool? Ralf Goericke, Elizabeth Venrick, Arnold Mantyla, Steven J. Bograd, Franklin B. Schwing, Adriana Huyer, Robert L. Smith, Patricia A. Wheeler, Rian Hooff, William T. Peterson, Francisco Chavez, Curtis Collins, Baldo Marinovic, Nancy Lo, Gilberto Gaxiola-Castro, Reginaldo Durazo, K. David Hyrenbach, and William J. Sydeman
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2004: Coastal Pelagic Finfish, Market Squid, Sea Urchin, Lobster, Spot and Ridgeback Prawn, Groundfish, Highly Migratory Species, Ocean Salmon, Nearshore Live-Fish, Pacific Herring, and Recreational
- Publications
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CalCOFI Rep., Vol. 45, 2004 (Complete pdf; individual pdf links below)
Symposium of the CalCOFI Conference, 2003: Environmental Variability And Its Impact On Invertebrate Fisheries.
I. Reports, Review, and Publications
- The State of the California Current, 2003–2004: A Rare “Normal” Year. Ralf Goericke, Steven J. Bograd, Gilberto Gaxiola-Castro, José Gómez-Valdes, Rian Hooff, Adriana Huyer, K. David Hyrenbach, Bertha E. Lavaniegos, Arnold Mantyla, William T. Peterson, Franklin B. Schwing, Robert L. Smith, William J. Sydeman, Elizabeth Venrick, and Patricia A. Wheeler
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2003: Market Squid, Coastal Pelagic Finfish, Dungeness Crab, Sea Urchin, Groundfish, Ocean Salmon, Tuna, Nearshore Live-Fish, Pacific Herring, and Rock Crab
- Publications
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CalCOFI Rep., Vol. 44, 2003 (Complete pdf; individual pdf links below)
I. Reports, Review, and Publications
- The State of the California Current, 2002–2003: Tropical and Subarctic Influences Vie for Dominance. Elizabeth Venrick, Steven J. Bograd, David Checkley, Reginaldo Durazo, Gilberto Gaxiola-Castro, John Hunter, Adriana Huyer, K. David Hyrenbach, Bertha E.Laveniegos, ArnoldMantyla, Franklin B. Schwing, Robert L. Smith, William J. Sydeman, Patricia A. Wheeler
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2002: Market Squid, Sea Urchin, Dungeness Crab, Prawn, Coastal Pelagic Finfish, Albacore, Ocean Salmon, Nearshore Live-Fish, Pacific Herring, and Recreational
- Publications
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CalCOFI Reports, Vol. 43, 2002 (Complete pdf; individual pdfs links below)
Symposium of the CalCOFI Conference, 2001 - Rebuilding California's Abalone Stocks
In Memoriam: Mia Jean Tegner
I. Reports, Review, and Publications
- The State of the California Current, 2001–2002: Will the California Current System Keep Its Cool, or Is El Niño Looming? Franklin B. Schwing , Steven J. Bograd, Curtis A. Collins, Gilberto Gaxiola-Castro, Joaquin García, Ralf Goericke, José Goméz-Valdéz, Adriana Huyer, K. David Hyrenbach, P. Michael Kosro, Bertha E. Lavaniegos, Ronald J. Lynn, Arnold W. Mantyla, Mark D. Ohman , William T. Peterson, Robert L. Smith, William J. Sydeman, Elizabeth Venrick, and Patricia A. Wheeler
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2001: Market Squid, Sea Urchin, Dungeness Crab, Lobster, Prawn, Abalone, Groundfish, Swordfish and Shark, Coastal Pelagic Finfish,Ocean Salmon, Nearshore Live-fish, Pacific Herring, White Seabass, and Kelp
- Publications
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CalCOFI Reports, Vol. 42, 2001 (Complete pdf, individual pdfs links below)
Symposium: Ecosystem-based Fishery Management In The Nearshore Environment
In Memoriam: Michael M. Mullin & Garth I. Murphy
I. Reports, Review, and Publications
- The State of the California Current, 2000-2001: A Third Straight La Nina Year. Reginaldo Durazo, Timothy R. Baumgartner, Steven J. Bograd, Curtis A. Collins, Sarita de la Campa, Joaquin Garcia, Gilberto Gaxiola-Castro, Adriana Huyer, K. David Hyrenbach, Daniel Loya, Ronald J. Lynn, Franklin B. Schwing, Robert L. Smith, William J. Sydeman, and Pat Wheeler
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 2000: Market Squid, Sea Urchin, Prawn, White Abalone, Groundfish, Ocean Salmon, Pacific Sardine, Pacific Herring, Pacific Mackerel, Nearshore Live-Fish, Halibut, Yellowfin Tuna, White Seabass, and Kelp
- Publications
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CalCOFI Reports, Vol. 41, 2000 (Complete pdf, individual pdf links below)
Fiftieth Anniversary Symposium: THE ECOLOGICAL EFFECTS OF THE 1998 EL NINO IN EASTERN BOUNDARY CURRENTS
I. Reports, Review, and Publications
- The State of the California Current, 1999-2000: Forward to a New Regime? Steven J. Bograd, Paul M. DiGiacomo, Reginaldo Durazo, Thomas L. Hayward, K.David Hyrenbach, Ronald J. Lynn, Arnold W Mantyla, Franklin B. Schwing, William J.Sydeman, Timothy Baumgartner, Bertha Lavaniegos, and Chris S. Moore
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 1999: Market Squid, Dungeness Crab, Sea Urchin, Prawn, Abalone, Groundfish, Swordfish and Shark, Ocean Salmon, Nearshore Finfish, Pacific Sardine, Pacific Herring, Pacific Mackerel, Reduction, White Seabass,and Recreational
- Publications
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CalCOFI Reports Vol 40, 1999 (Complete pdf; individual pdf links below)
Symposium: A CONTINUING DIALOG ON NO-TAKE RESERVES FOR RESOURCE MANAGEMENT
- The State of the California Current in 1998-1999: Transition to Cool-Water Conditions. Thomas L. Hayward, Tim R. Baumgartner, David M. Checkley, Reginaldo Durazo, Gilbert Gaxiola-Castro, K. David Hyrenbach, Arnold W Mantyla, Michael M. Mullin, Tom Murphree, Franklin B. Schwing, Paul E. Smith, and Mia J. Tegner
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 1998: Pacific Sardine, Pacific Mackerel, Pacific Herring, Market Squid, Sea Urchin, Groundfishes, Swordfish, Sharks, Nearshore Finfishes, Abalone, Dungeness Crab, Prawn, Ocean Salmon, White Seabass, and Recreational
- Index to “Review of Some California Fisheries,” 1977-1998
- Brown Shrimp Fishery in the Gulf of California. Enrique Morales-Bojdrquez andjuana Ldpez-Martinez
- Publications
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CalCOFI Reports, Vol. 39, 1998 (complete report pds; individual pdf links below)
Symposium of the CalCOFI Conference, 1997: MARKET SQUID: WHAT WE KNOW AND WHAT WE NEED TO KNOW FOR EFFECTIVE MANAGEMENT
I. Reports, Review, and Publications
- The State of the California Current, 1997-1998: Transition to El Nino Conditions. Ronald J. Lynn, Tim Baumgartner, Joaquin Garcia, Curtis A. Collins, Thomas L. Hayward, K. David Hyrenbach, ArnoldW. Mantyla, Tom Murphree, Amy Shankle, Franklin B. Schwing, Keith M. Sakuma, and Mia J. Tegner
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 1997
- Publications
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CalCOFI Reports, Vol. 38, 1997 (complete report pdf; individual pdf links below)
Symposium of the CalCOFI Conference, 1996: THE 1996 HAKE SYMPOSIUM
I. Reports, Review, and Publications
- The State of the California Current, 1996-1997: Mixed Signals from the Tropics. Franklin B. Schwing, Thomas L. Hayward, Keith M. Sakuma, Tom Murphree, Affonso S. Mascarenas Jr., Sergio I Larios Castillo, ArnoldW Mantyla, Sherry L. Cummings, Francisco P Chavez, Kenneth Baltz, and David G. Ainley
- Report of the CalCOFI Committee
- Review of Some California Fisheries for 1996
- Publications
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CalCOFI Reports, Vol. 27, 1986 (Complete report pdf; individual pdf links below)
Symposium of the CalCOFI Conference, 1985: SOUTHERN CALIFORNIA NEARSHORE WATERS: SELECTED PATTERNS AND PROCESSES
I. Reports, Review, and Publications
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CalCOFI Reports, Vol. 24, 1983 (Complete pdf; individual pdf links below)
Symposium from CalCOFI Conference 1982: The Larger Pelagic Fishes Of The California Current
I. Reports, Review, and Publications
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Symposium 1978: NONCONSUMABLE LIVING RESOURCES OF THE CALIFORNIA CURRENT: INTERACTIONS WITH CONSUMABLE RESOURCES AND THEIR EXPLOITATION
Symposium 1979: CLIMATE AND ECOLOGICAL REGIMES
IN MEMORIAM: Elbert Halvor Ahlstrom and Carl Leavitt Hubbs
I. Reports, Review, and Publications
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CalCOFI Reports, Vol. 16, 1972 (Complete report pdf; individual pdf links below)
Symposium: Pollutants and Contaminants in the California Current System.
I. Review of Activities of 1 July 1970-30 June 1971
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