2019-02-13 15:42:52,450 INFO     quick_adcp   importing numpy version 1.8.2
2019-02-13 15:42:52,464 INFO     quick_adcp   importing matplotlib version 1.4.3
2019-02-13 15:42:52,564 INFO     quick_adcp   =====================================================
2019-02-13 15:42:52,564 INFO     quick_adcp   =====================================================
2019-02-13 15:42:52,564 INFO     quick_adcp   command line was: /usr/local/currents/bin/run_quick.py -d os75nb
2019-02-13 15:42:52,564 INFO     quick_adcp   cwd is /home/data/RL1901/proc/os75nb
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2019-02-13 15:42:52,573 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,573 INFO     quick_adcp   step 1: set up files in "edit" directory 

2019-02-13 15:42:52,573 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,573 INFO     quick_adcp   step 2: scan files for time range

2019-02-13 15:42:52,650 INFO     quick_adcp   looking for database with adcpdb/a_rl*.blk
2019-02-13 15:42:52,650 INFO     quick_adcp   database found: listing blocks
2019-02-13 15:42:52,659 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,659 INFO     quick_adcp   step 3: generate averaged data...
2019-02-13 15:42:52,683 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,683 INFO     quick_adcp   step 4: load averaged data (to database)
2019-02-13 15:42:52,714 INFO     quick_adcp   database time range:
2019-02-13 15:42:52,714 INFO     quick_adcp   2019/02/04  18:52:53 to 2019/02/13  15:38:21
2019-02-13 15:42:52,714 INFO     quick_adcp   (34.786725 to 43.651632)
2019-02-13 15:42:52,724 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,725 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2019-02-13 15:42:52,725 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,725 INFO     quick_adcp   step 6: run setflags?

2019-02-13 15:42:52,751 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:52,751 INFO     quick_adcp   step 7: get navigation

2019-02-13 15:42:53,015 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:53,015 INFO     quick_adcp   step 8: list heading

2019-02-13 15:42:53,032 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:53,032 INFO     quick_adcp   step 9: plot heading correction

2019-02-13 15:42:53,489 INFO     quick_adcp   
-------------------------
2019-02-13 15:42:53,489 INFO     quick_adcp   ---- running navsteps ---
2019-02-13 15:42:53,489 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,489 INFO     quick_adcp   step 10: nav steps: run adcpsect
2019-02-13 15:42:53,489 INFO     quick_adcp   navstep 1
2019-02-13 15:42:53,518 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,518 INFO     quick_adcp   step 11: nav steps: run refabs
2019-02-13 15:42:53,518 INFO     quick_adcp   navstep 2
2019-02-13 15:42:53,543 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,543 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2019-02-13 15:42:53,543 INFO     quick_adcp   navstep 3
2019-02-13 15:42:53,622 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,622 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2019-02-13 15:42:53,622 INFO     quick_adcp   navstep 4
2019-02-13 15:42:53,715 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,715 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2019-02-13 15:42:53,715 INFO     quick_adcp   navstep 5
2019-02-13 15:42:53,959 INFO     quick_adcp   -------------------------
2019-02-13 15:42:53,959 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2019-02-13 15:42:53,959 INFO     quick_adcp   navstep 6
2019-02-13 15:42:54,374 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:54,374 INFO     quick_adcp   step 10: find profile flags 

2019-02-13 15:42:54,452 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:54,452 INFO     quick_adcp   step 11: apply editing 

2019-02-13 15:42:54,497 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:54,497 INFO     quick_adcp   step 12: run calibration steps 

2019-02-13 15:42:55,162 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:55,162 INFO     quick_adcp   step 13: extract and plot temperature 

2019-02-13 15:42:55,335 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:55,335 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2019-02-13 15:42:55,457 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:55,457 INFO     quick_adcp   step 15: extract matlab "allbins" 

2019-02-13 15:42:55,641 INFO     quick_adcp   ---------------------------------------------
2019-02-13 15:42:55,641 INFO     quick_adcp   writing "cruise_info.txt"