2024-11-24 21:51:46,121 INFO quick_setup fix file is a_sr.gps 2024-11-24 21:51:46,121 INFO quick_setup reflayer: ref_method = refsm 2024-11-24 21:51:46,121 INFO quick_setup reflayer: refuv_source = nav 2024-11-24 21:51:46,121 INFO quick_setup reflayer: refuv_smoothwin = 3 2024-11-24 21:51:46,121 INFO quick_adcp ===================================================== 2024-11-24 21:51:46,121 INFO quick_adcp ===================================================== 2024-11-24 21:51:46,122 INFO quick_adcp command line was: /usr/local/bin/run_quick.py -d os38nb 2024-11-24 21:51:46,122 INFO quick_adcp cwd is /mnt/md0/data/SR2421/proc/os38nb about to run these steps: - write_clearflags - scandata - avg_and_load - codaseditsetup - setflags - getnav - lst_hdg - navsteps - lst_temp - plot_temp - lst_npings - calib - matfiles - adcpsect - refabs - smoothnav - putnav - refplots - codaseditsetup 2024-11-24 21:51:46,143 INFO quick_setup found 111 files using wildcard expansion relative to scan directory wildcard string was: "/home/data/SR2421/raw/os38/*.raw" 2024-11-24 21:51:46,143 INFO quick_setup presently in scan, writing filelist to /mnt/md0/data/SR2421/proc/os38nb/ping/datafile_list.txt 2024-11-24 21:51:46,144 INFO quick_setup found 111 raw data files 2024-11-24 21:51:46,144 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,144 INFO quick_adcp step 1: set up files in "edit" directory 2024-11-24 21:51:46,144 INFO quick_run file exists (edit/clearflags.tmp). not writing 2024-11-24 21:51:46,144 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,144 INFO quick_adcp step 2: scan files for time range 2024-11-24 21:51:46,272 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,272 INFO quick_adcp step 3: generate averaged data... 2024-11-24 21:51:46,272 INFO quick_run file load/ping_editparams.txt exists. not replacing 2024-11-24 21:51:46,336 INFO pingavg ---------------- 2024-11-24 21:51:46,336 INFO pingavg sonar is os38nb 2024-11-24 21:51:46,336 INFO pingavg Pingavg.run for time range 328.833361 to 328.910893 2024-11-24 21:51:46,336 INFO pingavg transducer offset: xducer_dx = -2.000, xducer_dy = 10.000 2024-11-24 21:51:46,336 INFO pingavg shifted positions applied to *.gpst2 and *.uvship' 2024-11-24 21:51:46,336 INFO pingavg ---------------- 2024-11-24 21:51:46,339 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,339 INFO quick_adcp step 4: load averaged data (to database) 2024-11-24 21:51:46,344 INFO quick_run loaded time range: 2024/11/24 01:31:14 to 2024/11/24 21:51:14 2024-11-24 21:51:46,370 INFO quick_run 10 block files present 2024-11-24 21:51:46,373 INFO quick_adcp database time range: 2024-11-24 21:51:46,373 INFO quick_adcp 2024/11/15 17:31:13 to 2024/11/24 21:51:14 2024-11-24 21:51:46,373 INFO quick_adcp (319.730012 to 328.910579) 2024-11-24 21:51:46,388 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,388 INFO quick_adcp step 5: set up files for codas editing (gautoedit.py) 2024-11-24 21:51:46,389 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,389 INFO quick_adcp step 6: run setflags? 2024-11-24 21:51:46,427 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,427 INFO quick_adcp step 7: get navigation 2024-11-24 21:51:46,428 INFO quick_subs navigation file nav/a_sr.gps created from load/*.gps2 2024-11-24 21:51:46,429 INFO quick_subs navigation file nav/a_sr.agt created from load/*.gpst2 2024-11-24 21:51:46,683 INFO quick_run plotted uvship 2024-11-24 21:51:46,683 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:46,683 INFO quick_adcp step 8: list heading 2024-11-24 21:51:46,702 INFO quick_run ... headings extracted 2024-11-24 21:51:46,702 INFO quick_adcp ------------------------- 2024-11-24 21:51:46,702 INFO quick_adcp ---- running navsteps --- 2024-11-24 21:51:46,702 INFO quick_adcp ------------------------- 2024-11-24 21:51:46,702 INFO quick_adcp step 9: nav steps: run adcpsect 2024-11-24 21:51:46,702 INFO quick_adcp navstep 1 2024-11-24 21:51:46,745 INFO quick_run ... ran adcpsect for navsteps 2024-11-24 21:51:46,745 INFO quick_adcp ------------------------- 2024-11-24 21:51:46,745 INFO quick_adcp step 10: nav steps: run refabs 2024-11-24 21:51:46,745 INFO quick_adcp navstep 2 2024-11-24 21:51:46,757 INFO quick_run ... ran refabs for navsteps 2024-11-24 21:51:46,757 INFO quick_adcp ------------------------- 2024-11-24 21:51:46,757 INFO quick_adcp step 11: nav steps: run smoothr for plots 2024-11-24 21:51:46,758 INFO quick_adcp navstep 3 2024-11-24 21:51:46,859 INFO quick_run ... ran smoothr 2024-11-24 21:51:46,859 INFO quick_adcp ------------------------- 2024-11-24 21:51:46,859 INFO quick_adcp step 12: nav steps: smooth navigation for velocities 2024-11-24 21:51:46,859 INFO quick_adcp navstep 4 2024-11-24 21:51:46,859 INFO quick_run smoothing method for ship speed: refsm 2024-11-24 21:51:46,859 INFO quick_run smoothing window: 3 2024-11-24 21:51:46,859 INFO quick_run ship speed source: nav 2024-11-24 21:51:47,030 INFO quick_run ... shipspeed smoothing step done 2024-11-24 21:51:47,030 INFO quick_adcp ------------------------- 2024-11-24 21:51:47,030 INFO quick_adcp step 13: nav steps: put positions and uvship from refsm into codasdb 2024-11-24 21:51:47,030 INFO quick_adcp navstep 5 2024-11-24 21:51:47,054 INFO quick_run ... ran put_txy 2024-11-24 21:51:47,078 INFO quick_run ... ran put_tuv 2024-11-24 21:51:47,224 INFO quick_run ... made navigation plot 2024-11-24 21:51:47,224 INFO quick_adcp ------------------------- 2024-11-24 21:51:47,224 INFO quick_adcp step 14: nav steps: make reflayer plots 2024-11-24 21:51:47,224 INFO quick_adcp navstep 6 2024-11-24 21:51:47,631 INFO quick_run ... made reflayer plots 2024-11-24 21:51:47,631 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:47,631 INFO quick_adcp step 9: run calibration steps 2024-11-24 21:51:47,693 INFO quick_run ...bottom track info in check cal/botmtrk 2024-11-24 21:51:47,747 INFO quick_run ... watertrack info in cal/watertrk 2024-11-24 21:51:48,240 INFO quick_run ... check cal/watertrk for estimate 2024-11-24 21:51:48,240 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:48,240 INFO quick_adcp step 10: extract and plot temperature 2024-11-24 21:51:48,366 INFO quick_run plotted temperature 2024-11-24 21:51:48,366 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:48,366 INFO quick_adcp step 11: extract and plot number of pings per ensemble 2024-11-24 21:51:48,457 INFO quick_run ... plotted number of pings per ensemble 2024-11-24 21:51:48,457 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:48,457 INFO quick_adcp step 12: extract matlab "allbins" 2024-11-24 21:51:49,093 INFO quick_adcp --------------------------------------------- 2024-11-24 21:51:49,093 INFO quick_adcp writing "cruise_info.txt" 2024-11-24 21:51:49,095 INFO run_quick copying NOFIG to /home/adcp/www/figures/os38nb_hcorr_plot.png 2024-11-24 21:51:49,096 INFO run_quick copying NOFIG to /home/adcp/www/figures/thumbnails/os38nb_hcorr_plot_thumb.png 2024-11-24 21:51:49,098 INFO run_quick copying contour/contour_uv.mat to /home/adcp/www/data/os38nb_cont_uv.mat 2024-11-24 21:51:49,099 INFO run_quick copying vector/vector_uv.mat to /home/adcp/www/data/os38nb_vect_uv.mat 2024-11-24 21:51:49,099 INFO run_quick copying contour/contour_xy.mat to /home/adcp/www/data/os38nb_cont_xy.mat 2024-11-24 21:51:49,100 INFO run_quick copying vector/vector_xy.mat to /home/adcp/www/data/os38nb_vect_xy.mat 2024-11-24 21:51:49,100 INFO run_quick copying edit/a_sr.tem to /home/adcp/www/data/os38nb_temp.asc 2024-11-24 21:51:49,667 INFO run_quick copying /home/data/SR2421/proc/os38nb/contour/os38nb.nc to /home/adcp/www/data/os38nb.nc 2024-11-24 21:51:49,667 INFO run_quick nc_compressed: ddstep is 1 2024-11-24 21:51:49,752 INFO run_quick success: made compressed nc file /home/adcp/uhdas_tmp/os38nb_compr.nc 2024-11-24 21:51:49,794 INFO run_quick generating pingstats for os38nb 2024-11-24 21:51:49,794 INFO run_quick Ending quick_adcp.py