California Cooperative Oceanic Fisheries Investigations

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Program Overview

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CalCOFI 75 Sta PatternThe California Cooperative Oceanic Fisheries Investigations (CalCOFI) are a unique partnership of the California Department of Fish & Wildlife, NOAA Fisheries Service and Scripps Institution of Oceanography. The organization was formed in 1949 to study the ecological aspects of the sardine population collapse off California. Today our focus has shifted to the study of the marine environment off the coast of California, the management of its living resources, and monitoring the indicators of El Nino and climate change. CalCOFI conducts quarterly cruises off southern & central California, collecting a suite of hydrographic and biological data on station and underway.  Data collected at depths down to 500 m include: temperature, salinity, oxygen, phosphate, silicate, nitrate and nitrite, chlorophyll, transmissometer, PAR, C14 primary productivity, phytoplankton biodiversity, zooplankton biomass, and zooplankton biodiversity.

Last Updated on Wednesday, 02 January 2013 11:00 Read more...
 

2013 CalCOFI Cruise Schedule

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2013 Cruises:
Cruise dates are subject to change so check back often or check the ship's schedule

Upcoming
  • CalCOFI 1307NH • 5 - 23 July 2013 (Fri-Tue) • RV New Horizon • Loading 1-4 July 2013 (Mon-Thur), San Diego; offload in San Diego 24 July 2013 (Wed).
  • CalCOFI 1310NH • 09 - 25 Oct 2013 (Wed-Fri) • RV New Horizon • Loading 06-08 Oct 2013 (Sun-Tues), San Diego; offload in San Diego 26 Oct 2013 (Sat).
Completed
  • CalCOFI 1301SH • 10 Jan - 02 Feb 2013 (Thurs-Sat) • RV Bell M Shimada •  Loading 07-09 Jan 2013 (Mon afternoon truck load at SIO; ship loading Tues 0800), San Diego B St Pier; offload San Diego 3 (Sun) or 4 (Mon) Feb 2013 .
  • CalCOFI 1304SH • 06 - 30 Apr 2013 (Sat-Tue) • RV Bell M Shimada• Loading 04-05 Apr 2013 (Thu-Fri), San Diego; offload in San Francisco 30 Apr 2013 (Tues)

Additonal Information:
RV Bell M Shimada Information & Schedule Contact -- RV New Horizon Information & 2013 Schedule -- RV Ocean Starr Information 

Last Updated on Friday, 10 May 2013 16:49
 

2013 CalCOFI Conference

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CalCOFI 64th Anniversary Logo
The 2013 CalCOFI Conference will be in the NOAA Fisheries Southwest Fisheries Science Center on the Scripps Institution of Oceanography Campus, San Diego, in La Jolla, CA, 9-11 December, 2013 ( Map )

CalCOFI Conference 2013 Official Page - go to the official Conference page for the latest information & registration

The Symposium of the Conference
Forage species and assemblages in the California Current System
Forage fish and squids have long been recognized to be an important component of the California Current System, beyond the importance of sardine, market squid, anchovy and mackerels that support both large and small fisheries. Studies to date have generally taken a single species approach to forage fish. Assessments and monitoring are currently conducted on discrete species. However it is increasingly recognized that the forage species constitute a dynamic assemblage where species dominance varies over time, outbursts and rapid declines are endemic, and the roles of predator and prey in the ecosystem change both with species abundance and with growth in size within individual species. The complex role of forage needs to be better understood as ecosystem-based management becomes established practice.

For the 2013 CalCOFI Symposium we seek wide-ranging  contributions on any aspect of forage species and assemblages and their role in the California Current  System. Studies utilizing  long time series data that apply multidisciplinary approaches are particularly encouraged.

The CalCOFI Symposium will be convened by: Sam McClatchie, NOAA Fisheries,
SWFSC


Last Updated on Friday, 08 February 2013 11:31 Read more...
 

Vol 54 2013

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CalCOFI Report Vol 54, 2013

Submitted Vol 54 Journal Articles:
Last Updated on Monday, 20 May 2013 09:59 Read more...
 

Recent Trends

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Recent California Current Ecosystem Data Reports from CalCOFI and Affiliates
Last Updated on Friday, 01 March 2013 15:13
 

Available Data

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Since 1949, hydrographic and biological data of the California Current System have been collected on CalCOFI cruises. The 61 year hydrographic time-series includes temperature, salinity, oxygen and phosphate observations. In 1961, nutrient analysis expanded to include silicate, nitrate and nitrite; in 1973, chlorophyll was added; in 1984, C14 primary productivity incubations were added; and in 1993, CTD profiling began.

>> Hydrographic Data - 1949 to Latest Update

CalCOFI Data Reports

  dreport  

Hydrographic Bottle

     

Primary Productivity

     

Macrozooplankton

     

Spatial Pattern Figures

     
description       description       description       description      
example       example       example       example      
download - mirror •       download - mirror •       download - mirror •       download - mirror •      
* Latest update: 201202.

Database Ready Files 

  dreport  

MS Access MDB

     

CSV - Btl / Cast Files

     

XML - Btl / Cast Files

     

SQL - Btl / Cast Files

     
14 Table - 50 MB Zip •       MDB Output - 38 MB Zip •       MDB Output - 50 MB Zip •       MDB Output - 45 MB Zip •      
example       example       example       example      
download - mirror       download - mirror       download - mirror       download - mirror      
* Latest update: 201203.

IEH Archive Files

  dreport  

IEH 128 Column

                             
description                              
example                              
download - mirror                              
* Latest update: 201203.

>> CTD Data - 1992 to Latest Update

CTD Zip Files

  dreport  

CTD Data

     

Data Descriptions

     

SBE Formats

     

CalCOFI Formats

     
latest final 1104       final       final asc - hdr       final csv-plot      
latest prelim 1304       preliminary       preliminary asc - hdr       preliminary csv-plot      
browse all       cast       cast       metadata      
* Latest update: 03May2013: CalCOFI 1304SH preliminary CTD data posted; 1104 Final bottle-corrected CTD data & plots posted
 

>> Net Sampling

Online Databases

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MacroZooplankton Biomass Data

     

Data Zoo

     

IchthyoDB

     

ZooDB

   

Pelagic Invert DB

Wet displacement volume from starboard side of Bongo Net•       CalCOFI Data •       Ichthyoplankton DB •       Zooplankton Database•     Collection Search Form•
downloadable csv •       download, plot, filter •       Mark Ohman Lab •       Mark Ohman Lab •     SIO •
 

>> Underway Sampling

Maps, Data, & DataBases

  dreport  

TSG & Meteorological

     

CUFES

     

Mammal Observations

     

Bird Observations

     
Underway Data       SWFSC - FRD       Census       Census      
Information       Information       Census Log       Census Log      
* Latest update: 201101.

 

Data Usage and Distribution Policy
CalCOFI hydrographic and plankton data are distributed to the community for use without restriction. Unless otherwise noted, these data can be considered to be final data which have been evaluated using CalCOFI data quality control procedures. Methods for data collection and processing are summarized in CalCOFI Data Reports introduction. To see the introduction or methods used on specific cruises, refer to the Data Report PDF page. Preliminary data from recent cruises for which the data processing is not complete can generally be made available to those programs for which there is an operational need. Refer to the Contacts page for addressing such requests. We ask that these preliminary data not be published or redistributed.

 

Last Updated on Friday, 03 May 2013 16:58 Read more...
 

Volunteering

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Volunteers on CalCOFI
 

 

Opportunities to volunteer on CalCOFI Cruises in 2013

  • CalCOFI 1311NH • 9-25 Oct 2013 (Wed-Fri) • RV New Horizon • Loading 6-8 Oct 2013 (Sun-Tues), San Diego; offload in San Diego 26 Oct 2013 (Sat).

Interested in participating in an oceanographic cruise? CalCOFI cruises are staffed by personnel from the following agencies: National Marine Fisheries Service (NOAA), Integrative Oceanography Division at Scripps Institution of Oceanography, and California Department of Fish & Wildlife. Volunteers are recruited to help deploy equipment, collect data, and draw and analyze seawater samples. General criteria:

  • sea-worthiness (experience at sea, recreational is acceptable)
  • good health
  • scientific background
  • ability to follow detailed instructions carefully
  • ability to work safely on an oceanographic cruise
  • availability - most cruises are 18 - 20 days; some winter & spring cruises are longer
  • ability to work a 12hr watch (noon to midnight or midnight to noon) for +18 days
  • must have completed two years in college in the field of science

Additional information is available in the CalCOFI Handbook. If you are interested in participating, please send a resume and a brief description of your seagoing experience and interests to This e-mail address is being protected from spambots. You need JavaScript enabled to view it at Scripps Institution of Oceanography.

Last Updated on Monday, 20 May 2013 10:54
 

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